4WB5 Crystal structure of human cAMP-dependent protein kinase A (catalytic alpha subunit) date
authors Cheung, J., Ginter, C., Cassidy, M., Franklin, M.C., Rudolph, M.J., Hendrickson, W.A.
compound source
symmetry
R_factor
R_Free 0.1956
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.64
ligand ATP, MG, SEP, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


I


Primary referenceStructural insights into mis-regulation of protein kinase A in human tumors., Cheung J, Ginter C, Cassidy M, Franklin MC, Rudolph MJ, Robine N, Darnell RB, Hendrickson WA, Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):1374-9. doi: 10.1073/pnas.1424206112., Epub 2015 Jan 20. PMID:25605907
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]
  • Biological Unit Coordinates (4wb5.pdb1.gz) 132 Kb
  • LPC: Ligand-Protein Contacts for 4WB5
  • CSU: Contacts of Structural Units for 4WB5
  • Structure Factors (847 Kb)
  • Retrieve 4WB5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WB5 from S2C, [Save to disk]
  • Re-refined 4wb5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4WB5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4WB5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WB5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wb5_I] [4wb5] [4wb5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4WB5: [S_TK_X] [S_TKc ] by SMART
    • Other resources with information on 4WB5
  • Community annotation for 4WB5 at PDBWiki (http://pdbwiki.org)

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