4WHH A New Class of Peptidomimetics Targeting the Polo-box Domain of Polo-like kinase 1 date
authors Bang, J.K.
compound source
symmetry
R_factor
R_Free 0.2361
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand 56A, NH2, QAC, SO4, TPO enzyme
Primary referenceA New Class of Peptidomimetics Targeting the Polo-Box Domain of Polo-Like Kinase 1., Ahn M, Han YH, Park JE, Kim S, Lee WC, Lee SJ, Gunasekaran P, Cheong C, Shin SY Sr, Kim HY, Ryu EK, Murugan RN, Kim NH, Bang JK, J Med Chem. 2014 Nov 5. PMID:25347203
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (4whh.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 4WHH
  • CSU: Contacts of Structural Units for 4WHH
  • Structure Factors (180 Kb)
  • Retrieve 4WHH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WHH from S2C, [Save to disk]
  • Re-refined 4whh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4WHH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4WHH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WHH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4whh] [4whh_A] [4whh_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4WHH
  • Community annotation for 4WHH at PDBWiki (http://pdbwiki.org)

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