4XIR Discovery of novel oxazepine and diazepine carboxamides as two new classes of heat shock protein 90 inhibitors date
authors Neubert, T., Zuccola, H.J.
compound source
symmetry
R_factor
R_Free 0.2205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
ligand 40X, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of novel oxazepine and diazepine carboxamides as two new classes of heat shock protein 90 inhibitors., Neubert T, Numa M, Ernst J, Clemens J, Krenitsky P, Liu M, Fleck B, Woody L, Zuccola H, Stamos D, Bioorg Med Chem Lett. 2015 Mar 15;25(6):1338-42. doi: 10.1016/j.bmcl.2015.01.023., Epub 2015 Jan 20. PMID:25677667
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (4xir.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 4XIR
  • CSU: Contacts of Structural Units for 4XIR
  • Structure Factors (1718 Kb)
  • Retrieve 4XIR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XIR from S2C, [Save to disk]
  • Re-refined 4xir structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XIR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4XIR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XIR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xir] [4xir_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4XIR: [HATPase_c ] by SMART
  • Other resources with information on 4XIR
  • Community annotation for 4XIR at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science