4XW4 X-ray structure of PKAc with AMPPNP, SP20, calcium ions date
authors Gerlits, O., Tian, J., Das, A., Taylor, S., Langan, P., Heller, T.W., Kovalevsky, A.
compound source
symmetry
R_factor
R_Free 0.2397
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.82
ligand ANP, CA, SEP, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referencePhosphoryl Transfer Reaction Snapshots in Crystals: Insights into the Mechanism of Protein Kinase A Catalytic Subunit., Gerlits O, Tian J, Das A, Taylor S, Langan P, Heller WT, Kovalevsky A, J Biol Chem. 2015 Apr 28. pii: jbc.M115.643213. PMID:25925954
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (4xw4.pdb1.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 4XW4
  • CSU: Contacts of Structural Units for 4XW4
  • Structure Factors (328 Kb)
  • Retrieve 4XW4 in mmCIF format [Save to disk]
  • Re-refined 4xw4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XW4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4XW4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XW4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xw4_B] [4xw4_A] [4xw4]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4XW4: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 4XW4
  • Community annotation for 4XW4 at PDBWiki (http://pdbwiki.org)

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