4Y8W Crystal Structure of Human Cytochrome P450 21A2 Progesterone Complex date
authors Pallan, P.S., Lei, L., Egli, M.
compound source
symmetry
R_factor
R_Free 0.28084
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.64
ligand HEM, SO4, STR enzyme
Gene HCG
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceHuman Cytochrome P450 21A2, the Major Steroid 21-Hydroxylase: Structure of the Enzyme-Progesterone Substrate Complex and Rate-Limiting C-H Bond Cleavage., Pallan PS, Wang C, Lei L, Yoshimoto FK, Auchus RJ, Waterman MR, Guengerich FP, Egli M, J Biol Chem. 2015 Apr 8. pii: jbc.M115.646307. PMID:25855791
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (225 Kb) [Save to disk]
  • Biological Unit Coordinates (4y8w.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (4y8w.pdb2.gz) 75 Kb
  • Biological Unit Coordinates (4y8w.pdb3.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 4Y8W
  • CSU: Contacts of Structural Units for 4Y8W
  • Structure Factors (587 Kb)
  • Retrieve 4Y8W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Y8W from S2C, [Save to disk]
  • Re-refined 4y8w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Y8W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4Y8W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4Y8W, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y8w_C] [4y8w_A] [4y8w] [4y8w_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4Y8W
  • Community annotation for 4Y8W at PDBWiki (http://pdbwiki.org)

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