4YDS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ATP, MG enzyme
Gene SACI
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe nucleotide-dependent interaction of FlaH and FlaI is essential for assembly and function of the archaellum motor., Chaudhury P, Neiner T, D'Imprima E, Banerjee A, Reindl S, Ghosh A, Arvai AS, Mills DJ, van der Does C, Tainer JA, Vonck J, Albers SV, Mol Microbiol. 2016 Feb;99(4):674-85. doi: 10.1111/mmi.13260. Epub 2015 Nov 17. PMID:26508112
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (4yds.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (4yds.pdb2.gz) 149 Kb
  • LPC: Ligand-Protein Contacts for 4YDS
  • CSU: Contacts of Structural Units for 4YDS
  • Structure Factors (104 Kb)
  • Retrieve 4YDS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YDS from S2C, [Save to disk]
  • Re-refined 4yds structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YDS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yds] [4yds_A]
  • SWISS-PROT database:

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