4YTC	Discovery of VX-509 (Decernotinib): A Potent and Selective Janus kinase (JAK) 3 Inhibitor for the Treatment of Autoimmune Disease	date
authors	Zuccola, H.J., Ledeboer, M.
compound		source
symmetry		R_factor R_Free 0.2128
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.16
ligand	4HW, PTR	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of VX-509 (Decernotinib): A Potent and Selective Janus kinase (JAK) 3 Inhibitor for the Treatment of Autoimmune Diseases., Farmer L, Ledeboer MW, Hoock T, Arnost MJ, Bethiel RS, Bennani YL, Black JJ, Brummel CL, Chakilam A, Dorsch WA, Fan B, Cochran J, Halas S, Harrington EM, Hogan JK, Howe D, Huang H, Jacobs DH, Laitinen LM, Liao S, Mahajan S, Marone V, Martinez-Botella G, McCarthy P, Messersmith D, Namchuk M, Oh L, Pierce AC, Raybuck SA, Rugg A, Salituro FG, Saxena K, Shannon D, Shlyakter D, Swenson L, Tian SK, Town C, Wang J, Wang T, Wannamaker MW, Winquist RJ, Zuccola HJ, J Med Chem. 2015 Jul 31. PMID:26230873

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (4ytc.pdb1.gz) 53 Kb LPC: Ligand-Protein Contacts for 4YTC CSU: Contacts of Structural Units for 4YTC Structure Factors (972 Kb) Retrieve 4YTC in mmCIF format [Save to disk] Re-refined 4ytc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YTC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4YTC

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ytc] [4ytc_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4YTC: [TyrKc ] by SMART

Other resources with information on 4YTC

Community annotation for 4YTC at PDBWiki (http://pdbwiki.org)

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