4ZHX Novel binding site for allosteric activation of AMPK date
authors Langendorf, C.G., Ngoei, K.R., Issa, S.M.A., Ling, N., Gorman, M.A., Parker, M.W., Sakamoto, K., Scott, J.W., Oakhill, J.S., Kemp, B.E.
compound source
symmetry
R_factor
R_Free 0.2430
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.99
ligand 4O7, AMP, C1V, C2Z, SEP, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C
  • histone serine kinase activi...


  • D, B


    F, E
  • cAMP-dependent protein kinas...


  • Primary referenceStructural basis of allosteric and synergistic activation of AMPK by furan-2-phosphonic derivative C2 binding., Langendorf CG, Ngoei KR, Scott JW, Ling NX, Issa SM, Gorman MA, Parker MW, Sakamoto K, Oakhill JS, Kemp BE, Nat Commun. 2016 Mar 8;7:10912. doi: 10.1038/ncomms10912. PMID:26952388
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (616 Kb) [Save to disk]
  • Biological Unit Coordinates (4zhx.pdb1.gz) 297 Kb
  • Biological Unit Coordinates (4zhx.pdb2.gz) 315 Kb
  • LPC: Ligand-Protein Contacts for 4ZHX
  • CSU: Contacts of Structural Units for 4ZHX
  • Structure Factors (3242 Kb)
  • Retrieve 4ZHX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZHX from S2C, [Save to disk]
  • Re-refined 4zhx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZHX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZHX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zhx_A] [4zhx_F] [4zhx_C] [4zhx_B] [4zhx_D] [4zhx_E] [4zhx]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4ZHX: [AMPKBI] [CBS] [S_TKc ] by SMART
  • Other resources with information on 4ZHX
  • Community annotation for 4ZHX at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science