4ZIE Crystal Structure of core/latch dimer of Bax in complex with BimBH3 date
authors Kumar, K.Krishna., Robin, A.Y., Westphal, D., Wardak, A.Z., Thompson, G.V., Dewson, G., Colman, P.M., Czabotar, P.E.
compound source
symmetry
R_factor
R_Free 0.2288
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of Bax bound to the BH3 peptide of Bim identifies important contacts for interaction., Robin AY, Krishna Kumar K, Westphal D, Wardak AZ, Thompson GV, Dewson G, Colman PM, Czabotar PE, Cell Death Dis. 2015 Jul 9;6:e1809. doi: 10.1038/cddis.2015.141. PMID:26158515
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (4zie.pdb1.gz) 112 Kb
  • LPC: Ligand-Protein Contacts for 4ZIE
  • CSU: Contacts of Structural Units for 4ZIE
  • Structure Factors (371 Kb)
  • Retrieve 4ZIE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZIE from S2C, [Save to disk]
  • Re-refined 4zie structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZIE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZIE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zie] [4zie_A] [4zie_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ZIE: [BCL ] by SMART
  • Other resources with information on 4ZIE
  • Community annotation for 4ZIE at PDBWiki (http://pdbwiki.org)

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