5A14 Human CDK2 with type II inhibitor date
authors Alexander, L.T., Elkins, J.M., Kopec, J., Fedorov, O., Savitsky, P.A., Moebitz, H., Cowan-Jacob, S.W., Szklarz, M., Pike, A.C.W., Carpenter, E.P., Krojer, T., Bountra, C., Edwards, A.M., Knapp, S.
compound source
symmetry
R_factor
R_Free 0.24017
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand ACE, LQ5 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceType II Inhibitors Targeting CDK2., Alexander LT, Mobitz H, Drueckes P, Savitsky P, Fedorov O, Elkins JM, Deane CM, Cowan-Jacob SW, Knapp S, ACS Chem Biol. 2015 Sep 18;10(9):2116-25. doi: 10.1021/acschembio.5b00398. Epub, 2015 Jul 20. PMID:26158339
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (5a14.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 5A14
  • CSU: Contacts of Structural Units for 5A14
  • Structure Factors (1376 Kb)
  • Retrieve 5A14 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A14 from S2C, [Save to disk]
  • Re-refined 5a14 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5A14 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5A14
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a14] [5a14_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5A14: [S_TKc ] by SMART
    • Other resources with information on 5A14
  • Community annotation for 5A14 at PDBWiki (http://pdbwiki.org)

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