5A52 The crystal structure of Arabidopsis thaliana CAR1 in complex with one calcium ion date
authors Fernandez, D., Marquez, J.A.
compound source
symmetry
R_factor
R_Free 0.2431
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.65
ligand CA, GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCalcium-dependent oligomerization of CAR proteins at cell membrane modulates ABA signaling., Diaz M, Sanchez-Barrena MJ, Gonzalez-Rubio JM, Rodriguez L, Fernandez D, Antoni R, Yunta C, Belda-Palazon B, Gonzalez-Guzman M, Peirats-Llobet M, Menendez M, Boskovic J, Marquez JA, Rodriguez PL, Albert A, Proc Natl Acad Sci U S A. 2016 Jan 19;113(3):E396-405. doi:, 10.1073/pnas.1512779113. Epub 2015 Dec 30. PMID:26719420
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (5a52.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 5A52
  • CSU: Contacts of Structural Units for 5A52
  • Structure Factors (387 Kb)
  • Retrieve 5A52 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A52 from S2C, [Save to disk]
  • Re-refined 5a52 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5A52 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5A52
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a52] [5a52_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5A52: [C2 ] by SMART
    • Other resources with information on 5A52
  • Community annotation for 5A52 at PDBWiki (http://pdbwiki.org)

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