5AEN Structure of human Leukotriene A4 hydrolase in complex with inhibitor dimethyl(2- (4-phenoxyphenoxy)ethyl)amine date
authors Moser, D., Wittmann, S.K., Kramer, J., Blocher, R., Achenbach, J., Pogoryelov, D., Proschak, E.
compound source
symmetry
R_factor
R_Free 0.1888
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.86
ligand DP8, IMD, YB, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePENG: A Neural Gas-Based Approach for Pharmacophore Elucidation. Method Design, Validation, and Virtual Screening for Novel Ligands of LTA4H., Moser D, Wittmann SK, Kramer J, Blocher R, Achenbach J, Pogoryelov D, Proschak E, J Chem Inf Model. 2015 Feb 9. PMID:25625859
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk]
  • Biological Unit Coordinates (5aen.pdb1.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 5AEN
  • CSU: Contacts of Structural Units for 5AEN
  • Structure Factors (800 Kb)
  • Retrieve 5AEN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AEN from S2C, [Save to disk]
  • Re-refined 5aen structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5AEN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5AEN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 5AEN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5aen] [5aen_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5AEN: [Leuk-A4-hydro_C ] by SMART
    • Other resources with information on 5AEN
  • Community annotation for 5AEN at PDBWiki (http://pdbwiki.org)

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