5AHA Disubstituted bis-THF moieties as new P2 ligands in non-peptidal HIV- 1 Protease Inhibitors (II) date
authors Hohlfeld, K., Wegner, J.K., Kesteleyn, B., Linclau, B., Unge, J.
compound source
symmetry
R_factor
R_Free 0.22494
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.35
ligand CL, ZLP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDisubstituted Bis-THF Moieties as New P2 Ligands in Nonpeptidal HIV-1 Protease Inhibitors (II)., Hohlfeld K, Wegner JK, Kesteleyn B, Linclau B, Unge J, J Med Chem. 2015 Apr 30. PMID:25897791
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (5aha.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 5AHA
  • CSU: Contacts of Structural Units for 5AHA
  • Structure Factors (973 Kb)
  • Retrieve 5AHA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AHA from S2C, [Save to disk]
  • Re-refined 5aha structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5AHA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5AHA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 5AHA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5aha] [5aha_A] [5aha_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5AHA
  • Community annotation for 5AHA at PDBWiki (http://pdbwiki.org)

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