5ANE Transferase date Sep 07, 2015
title Crystal Structure Of Cdk2 In Complex With 6-Methoxy-7h-Purin Processed With The Crystaldirect Automated Mounting And Cry Technology
authors U.Zander, G.Hoffmann, M.Mathieu, J.P.Marquette, I.Cornaciu, F.Ci J.A.Marquez
compound source
Molecule: Cyclin-Dependent Kinase 2
Chain: A
Synonym: Cell Division Protein Kinase 2, P33 Protein Kinase
Ec: 2.7.11.22
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf21
symmetry Space Group: P 21 21 21
R_factor 0.204 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.636 71.320 72.047 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand SZL enzyme Transferase E.C.2.7.11.22 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAutomated harvesting and processing of protein crystals through laser photoablation., Zander U, Hoffmann G, Cornaciu I, Marquette JP, Papp G, Landret C, Seroul G, Sinoir J, Rower M, Felisaz F, Rodriguez-Puente S, Mariaule V, Murphy P, Mathieu M, Cipriani F, Marquez JA, Acta Crystallogr D Struct Biol. 2016 Apr 1;72(Pt 4):454-66. doi:, 10.1107/S2059798316000954. Epub 2016 Mar 24. PMID:27050125
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (5ane.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 5ANE
  • CSU: Contacts of Structural Units for 5ANE
  • Structure Factors (570 Kb)
  • Retrieve 5ANE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ANE from S2C, [Save to disk]
  • Re-refined 5ane structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5ANE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5ANE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ane_A] [5ane]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5ANE: [S_TKc ] by SMART
  • Other resources with information on 5ANE
  • Community annotation for 5ANE at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science