5ANV	Hydrolase	date	Sep 08, 2015
title	Mth1 In Complex With Compound 15
authors	J.A.Read, J.Breed
compound		source
Molecule: 7,8-Dihydro-8-Oxoguanine Triphosphatase Chain: A Synonym: Mth1,2-Hydroxy-Datp Diphosphatase, 8-Oxo-Dgtpase, Diphosphate-Linked Moiety X Motif 1, Nudix Motif 1; Ec: 3.6.1.55, 3.6.1.56 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Gold
symmetry	Space Group: P 21 21 2	R_factor 0.204 R_Free 0.211
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.390 66.090 36.160 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.16 Å
ligand	RGJ	enzyme	Hydrolase E.C.3.6.1.55 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Potent and Selective Inhibitors of MTH1 Probe Its Role in Cancer Cell Survival., Kettle JG, Alwan H, Bista M, Breed J, Davies NL, Eckersley K, Fillery S, Foote KM, Goodwin L, Jones DR, Kack H, Lau A, Nissink JW, Read J, Scott JS, Taylor B, Walker G, Wissler L, Wylot M, J Med Chem. 2016 Feb 16. PMID:26878898

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk] Biological Unit Coordinates (5anv.pdb1.gz) 55 Kb LPC: Ligand-Protein Contacts for 5ANV CSU: Contacts of Structural Units for 5ANV Structure Factors (904 Kb) Retrieve 5ANV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5ANV from S2C, [Save to disk] Re-refined 5anv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5ANV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5ANV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5anv] [5anv_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5ANV

Community annotation for 5ANV at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---