5BQH Isomerase Isomerase Inhibitor date May 29, 2015
title Discovery Of A Potent And Selective Mpges-1 Inhibitor For Th Treatment Of Pain
authors M.J.Fisher, M.A.Schiffler, S.L.Kuklish, S.Antonysamy, J.G.Luz
compound source
Molecule: Prostaglandin E Synthase
Chain: A
Synonym: Microsomal Glutathione S-Transferase 1-Like 1,Mgst Microsomal Prostaglandin E Synthase 1,Mpges-1,P53-Induced G Protein;
Ec: 5.3.99.3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptges, Mgst1l1, Mpges1, Pges, Pig12
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: H 3
R_factor 0.145 R_Free 0.165
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.464 76.464 123.770 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.60 Å
ligand 1KA, 4UK, BOG, GSH, PG4 enzyme Isomerase E.C.5.3.99.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • glutathione peroxidase activ...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (5bqh.pdb1.gz) 169 Kb
  • LPC: Ligand-Protein Contacts for 5BQH
  • CSU: Contacts of Structural Units for 5BQH
  • Structure Factors (357 Kb)
  • Retrieve 5BQH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5BQH from S2C, [Save to disk]
  • Re-refined 5bqh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5BQH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5BQH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5bqh_A] [5bqh]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5BQH
  • Community annotation for 5BQH at PDBWiki (http://pdbwiki.org)

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