5BTV Structural Protein date Jun 03, 2015
title Crystal Structure Of Human 14-3-3 Sigma In Complex With A Ta Peptide Surrounding Ps324
authors C.Ottmann, B.Schumacher, M.Bartel
compound source
Molecule: 14-3-3 Protein Sigma
Chain: A
Synonym: Epithelial Cell Marker Protein 1,Stratifin
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sfn, Hme1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Microtubule-Associated Protein Tau - Peptide Ps32
Chain: P
Fragment: Residues 323-326
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
symmetry Space Group: C 2 2 21
R_factor 0.160 R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.550 112.310 62.570 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand CA, CL, CSO, MG, SEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein kinase C inhibitor a...
  • positive regulation of prote...

  • Primary referenceInvolvement of 14-3-3 in tubulin instability and impaired axon development is mediated by Tau., Joo Y, Schumacher B, Landrieu I, Bartel M, Smet-Nocca C, Jang A, Choi HS, Jeon NL, Chang KA, Kim HS, Ottmann C, Suh YH, FASEB J. 2015 Oct;29(10):4133-44. doi: 10.1096/fj.14-265009. Epub 2015 Jun 23. PMID:26103986
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (5btv.pdb1.gz) 92 Kb
  • LPC: Ligand-Protein Contacts for 5BTV
  • CSU: Contacts of Structural Units for 5BTV
  • Structure Factors (267 Kb)
  • Retrieve 5BTV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5BTV from S2C, [Save to disk]
  • Re-refined 5btv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5BTV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5BTV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5btv_A] [5btv_P] [5btv]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5BTV: [14_3_3 ] by SMART
  • Other resources with information on 5BTV
  • Community annotation for 5BTV at PDBWiki (http://pdbwiki.org)

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