5C9V	Signaling Protein	date	Jun 29, 2015
title	Structure Of Human Parkin G319a
authors	T.Wauer, D.Komander
compound		source
Molecule: E3 Ubiquitin-Protein Ligase Parkin Chain: A Fragment: Unp Residues 137-465 Synonym: Parkin,Parkinson Juvenile Disease Protein 2,Parkin Disease Protein 2; Ec: 6.3.2.- Engineered: Yes Mutation: Yes Other_details: Engineered Mutation At Position G319a		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Park2, Prkn Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768 Expression_system_vector_type: Plasmid Expression_system_plasmid: Popink
symmetry	Space Group: H 3 2	R_factor 0.198 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 169.360 169.360 96.990 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.35 Å
ligand	GOL, SO4, ZN	enzyme	Ligase E.C.6.3.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Mechanism of phospho-ubiquitin-induced PARKIN activation., Wauer T, Simicek M, Schubert A, Komander D, Nature. 2015 Jul 10. doi: 10.1038/nature14879. PMID:26161729

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk] Biological Unit Coordinates (5c9v.pdb1.gz) 100 Kb LPC: Ligand-Protein Contacts for 5C9V CSU: Contacts of Structural Units for 5C9V Structure Factors (1218 Kb) Retrieve 5C9V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5C9V from S2C, [Save to disk] Re-refined 5c9v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5C9V in 3D

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Visual 3D analysis of 5C9V

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5c9v_A] [5c9v] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5C9V: [IBR ] by SMART

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