5DOM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of mature 2S albumin from Moringa oleifera seeds., Ullah A, Mariutti RB, Masood R, Caruso IP, Gravatim Costa GH, Millena de Freita C, Santos CR, Zanphorlin LM, Rossini Mutton MJ, Murakami MT, Arni RK, Biochem Biophys Res Commun. 2015 Dec 4;468(1-2):365-71. doi:, 10.1016/j.bbrc.2015.10.087. Epub 2015 Oct 23. PMID:26505799
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (5dom.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 5DOM
  • CSU: Contacts of Structural Units for 5DOM
  • Structure Factors (252 Kb)
  • Retrieve 5DOM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DOM from S2C, [Save to disk]
  • Re-refined 5dom structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DOM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dom] [5dom_A]
  • SWISS-PROT database:
  • Domain found in 5DOM: [AAI ] by SMART

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