5E08	Immune System Rna	date	Sep 28, 2015
title	Specific Recognition Of A Single-Stranded Rna Sequence By An Engineered Synthetic Antibody Fragment
authors	H.Huang, D.Qin, N.Li, Y.Shao, J.P.Staley, A.A.Kossiakoff, S.Koide, J.A.Piccirilli
compound		source
Molecule: Fab Heavy Chain Chain: H Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Fab Light Chain Chain: L Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Rna Chain: N Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: C 1 2 1	R_factor 0.209 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 199.515 63.401 57.061 90.00 97.51 90.00
method	X-Ray Diffraction	resolution	2.38 Å
Primary reference	Specific Recognition of a Single-Stranded RNA Sequence by a Synthetic Antibody Fragment., Shao Y, Huang H, Qin D, Li NS, Koide A, Staley JP, Koide S, Kossiakoff AA, Piccirilli JA, J Mol Biol. 2016 Sep 2. pii: S0022-2836(16)30349-7. doi:, 10.1016/j.jmb.2016.08.029. PMID:27593161

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk] Biological Unit Coordinates (5e08.pdb1.gz) 75 Kb CSU: Contacts of Structural Units for 5E08 Structure Factors (173 Kb) Retrieve 5E08 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5E08 from S2C, [Save to disk] Re-refined 5e08 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5E08 in 3D

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Visual 3D analysis of 5E08

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5e08_L] [5e08_H] [5e08] [5e08_N] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5E08: [IG_like] [IGv ] by SMART

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