5ECA Transferase date Oct 20, 2015
title Crystal Structure Of A Chimeric C-Src-Sh3 Domain With The Se The Rt-Loop From The Abl-Sh3 Domain At Ph 6.5
authors A.Camara-Artigas
compound source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Src
Chain: A
Fragment: Sh3 Domain
Synonym: Proto-Oncogene C-Src,Pp60c-Src,P60-Src
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Gene: Src
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: C 2 2 21
R_factor 0.158 R_Free 0.182
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.850 56.003 52.113 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.16 Å
ligand
enzyme Transferase E.C.2.7.10.2 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (5eca.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 5ECA
  • Structure Factors (435 Kb)
  • Retrieve 5ECA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ECA from S2C, [Save to disk]
  • Re-refined 5eca structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5ECA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5ECA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5eca] [5eca_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5ECA: [SH3 ] by SMART
    • Other resources with information on 5ECA
  • Community annotation for 5ECA at PDBWiki (http://pdbwiki.org)

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