5F27 Transcription date Dec 01, 2015
title Structure Of Transcriptional Regulatory Repressor Protein - Mycobacterium Tuberculosis In Complex With Compound 2 At 1. Resolution
authors S.Surade, M.Blaszczyk, P.O.Nikiforov, C.Abell, T.L.Blundell
compound source
Molecule: Hth-Type Transcriptional Regulator Ethr
Chain: A
Engineered: Yes
 Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 83331
Gene: Ethr, Etar, Mt3970
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.199 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
120.170 120.170 33.630 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.68 Å
ligand 5TT enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters., Nikiforov PO, Surade S, Blaszczyk M, Delorme V, Brodin P, Baulard AR, Blundell TL, Abell C, Org Biomol Chem. 2016 Jan 25. PMID:26806381
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (5f27.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 5F27
  • CSU: Contacts of Structural Units for 5F27
  • Structure Factors (1891 Kb)
  • Retrieve 5F27 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5F27 from S2C, [Save to disk]
  • Re-refined 5f27 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5F27 in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5F27
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5f27] [5f27_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5F27
  • Community annotation for 5F27 at PDBWiki (http://pdbwiki.org)

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