5FLQ Lyase date Oct 28, 2015
title Native State Mass Spectrometry, Surface Plasmon Resonance An Crystallography Correlate Strongly As A Fragment Screening Combination
authors L.A.Woods, O.Dolezal, B.Ren, J.H.Ryan, T.S.Peat, S.A.Poulsen
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonate Dehydratase II, Carbonic Anhydrase C, Ca Carbonic Anhydrase II, Ca-II, Human Carbonic Anhydrase II;
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Paca
symmetry Space Group: P 1 21 1
R_factor 0.155 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.585 41.534 72.013 90.00 104.49 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand GOL, IO2, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNative State Mass Spectrometry, Surface Plasmon Resonance, and X-ray Crystallography Correlate Strongly as a Fragment Screening Combination., Woods LA, Dolezal O, Ren B, Ryan JH, Peat TS, Poulsen SA, J Med Chem. 2016 Feb 29. PMID:26882437
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (5flq.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 5FLQ
  • CSU: Contacts of Structural Units for 5FLQ
  • Structure Factors (491 Kb)
  • Retrieve 5FLQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FLQ from S2C, [Save to disk]
  • Re-refined 5flq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5FLQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5FLQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5flq_A] [5flq]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5FLQ: [Carb_anhydrase ] by SMART
  • Other resources with information on 5FLQ
  • Community annotation for 5FLQ at PDBWiki (http://pdbwiki.org)

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