5FQR Signaling Protein date Dec 14, 2015
title Selective Estrogen Receptor Downregulator Antagonists: Tetrahydroisoquinoline Phenols 2.
authors J.S.Scott, A.Bailey, R.D.M.Davies, S.L.Degorce, P.A.Macfaul, H.Gi T.Moss, R.A.Norman, J.H.Pink, A.A.Rabow, B.Roberts, P.D.Smith
compound source
Molecule: Estrogen Receptor
Chain: A
Fragment: Ligand-Binding Domain, Unp Residues 307-554
Synonym: Er, Er-Alpha, Estradiol Receptor, Nuclear Receptor Subfamily 3 Group A Member 1, Estrogen Receptor Alpha;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Gold
symmetry Space Group: P 65 2 2
R_factor 0.21286 R_Free 0.23686
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.100 58.100 274.380 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.88 Å
ligand QHG enzyme
Primary referenceTetrahydroisoquinoline Phenols: Selective Estrogen Receptor Downregulator Antagonists with Oral Bioavailability in Rat., Scott JS, Bailey A, Davies RD, Degorce SL, MacFaul PA, Gingell H, Moss T, Norman RA, Pink JH, Rabow AA, Roberts B, Smith PD, ACS Med Chem Lett. 2015 Dec 19;7(1):94-9. doi: 10.1021/acsmedchemlett.5b00413., eCollection 2016 Jan 14. PMID:26819673
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (5fqr.pdb1.gz) 155 Kb
  • LPC: Ligand-Protein Contacts for 5FQR
  • CSU: Contacts of Structural Units for 5FQR
  • Structure Factors (435 Kb)
  • Retrieve 5FQR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FQR from S2C, [Save to disk]
  • Re-refined 5fqr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5FQR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5FQR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fqr] [5fqr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5FQR: [HOLI ] by SMART
  • Other resources with information on 5FQR
  • Community annotation for 5FQR at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science