5GR7 Immune System date Aug 08, 2016
title Mouse Mhc Class I H-2kd With A Mers-Cov-Derived Peptide 37-1
authors K.Liu, Y.Chai, J.Qi, W.Tan, W.J.Liu, G.F.Gao
compound source
Molecule: H-2 Class I Histocompatibility Antigen, K-D Alpha
Chain: A
Synonym: H-2k(D)
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: H2-K1, H2-K
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Beta-2-Microglobulin
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: B2m, Cdabp0092, Hdcma22p
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Mers-Cov Peptide
Chain: C
Engineered: Yes

Synthetic: Yes
Organism_scientific: Middle East Respiratory Syndrome Coron
Organism_taxid: 1335626
symmetry Space Group: P 21 21 21
R_factor 0.201 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.006 74.644 121.129 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
Gene
Ontology
ChainFunctionProcessComponent
B
  • cellular response to iron io...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (5gr7.pdb1.gz) 134 Kb
  • CSU: Contacts of Structural Units for 5GR7
  • Structure Factors (322 Kb)
  • Retrieve 5GR7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GR7 from S2C, [Save to disk]
  • Re-refined 5gr7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5GR7 in 3D
  • Proteopedia, because life has more than 2D.
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  • Visual 3D analysis of 5GR7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gr7_C] [5gr7_A] [5gr7_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5GR7
  • Community annotation for 5GR7 at PDBWiki (http://pdbwiki.org)

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