5GU3 Metal Binding Protein date Aug 24, 2016
title Crystal Structure Of Au(E).Cl-Apo-E45cr52c-Rhlfr
authors B.Maity, S.Abe, T.Ueno
compound source
Molecule: Ferritin Light Chain
Chain: X
Synonym: Ferritin L Subunit
Engineered: Yes
Mutation: Yes
 Organism_scientific: Equus Caballus
Organism_common: Horse
Organism_taxid: 9796
Gene: Ftl
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: F 4 3 2
R_factor 0.189 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
181.502 181.502 181.502 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.03 Å
ligand AU, CD, EDO, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceObservation of gold sub-nanocluster nucleation within a crystalline protein cage., Maity B, Abe S, Ueno T, Nat Commun. 2017 Mar 16;8:14820. doi: 10.1038/ncomms14820. PMID:28300064
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (5gu3.pdb1.gz) 697 Kb
  • LPC: Ligand-Protein Contacts for 5GU3
  • CSU: Contacts of Structural Units for 5GU3
  • Structure Factors (353 Kb)
  • Retrieve 5GU3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GU3 from S2C, [Save to disk]
  • Re-refined 5gu3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GU3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5GU3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gu3] [5gu3_X]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5GU3
  • Community annotation for 5GU3 at PDBWiki (http://pdbwiki.org)

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