5H19	Transferase Transferase Inhibitor	date	Oct 08, 2016
title	Eed In Complex With Prc2 Allosteric Inhibitor Eed162
authors	K.Zhao, M.Zhao, X.Luo, H.Zhang
compound		source
Molecule: Polycomb Protein Eed Chain: A Fragment: Unp Residues 76-441 Synonym: Heed,Wd Protein Associating With Integrin Cytoplas 1,Wait-1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eed Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-Kg
Molecule: Histone-Lysine N-Methyltransferase Ezh2 Chain: B Fragment: Unp Residues 40-68 Synonym: Enx-1,Enhancer Of Zeste Homolog 2,Lysine N-Methylt 6; Ec: 2.1.1.43 Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: C 2 2 21	R_factor 0.177 R_Free 0.215
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.490 90.990 179.170 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	LQF	enzyme	Transferase E.C.2.1.1.43 BRENDA
Gene Ontology	Chain Function Process Component A B
Primary reference	Discovery and Molecular Basis of a Diverse Set of Polycomb Repressive Complex 2 Inhibitors Recognition by EED., Li L, Zhang H, Zhang M, Zhao M, Feng L, Luo X, Gao Z, Huang Y, Ardayfio O, Zhang JH, Lin Y, Fan H, Mi Y, Li G, Liu L, Feng L, Luo F, Teng L, Qi W, Ottl J, Lingel A, Bussiere DE, Yu Z, Atadja P, Lu C, Li E, Gu J, Zhao K, PLoS One. 2017 Jan 10;12(1):e0169855. doi: 10.1371/journal.pone.0169855., eCollection 2017. PMID:28072869

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk] Biological Unit Coordinates (5h19.pdb1.gz) 68 Kb LPC: Ligand-Protein Contacts for 5H19 CSU: Contacts of Structural Units for 5H19 Structure Factors (2119 Kb) Retrieve 5H19 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5H19 from S2C, [Save to disk] Re-refined 5h19 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5H19 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5H19

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5h19_B] [5h19_A] [5h19] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5H19

Community annotation for 5H19 at PDBWiki (http://pdbwiki.org)

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