5HJ8 Transport Protein date Jan 13, 2016
title Bacterial Sodium Channel Neck 3g Mutant
authors A.Rohaim, D.L.Minor
compound source
Molecule: Ion Transport Protein
Chain: A, B, C, D
Fragment: Unp Residues 143-288
Synonym: Sodium Channel
Engineered: Yes
Mutation: Yes
Organism_scientific: Alkalilimnicola Ehrlichii
Organism_taxid: 351052
Gene: Mlg_0322
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.278 R_Free 0.304
crystal
cell
length a length b length c angle alpha angle beta angle gamma
138.310 153.350 165.810 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.70 Å
ligand CA enzyme
Gene MLG
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceUnfolding of a Temperature-Sensitive Domain Controls Voltage-Gated Channel Activation., Arrigoni C, Rohaim A, Shaya D, Findeisen F, Stein RA, Nurva SR, Mishra S, Mchaourab HS, Minor DL Jr, Cell. 2016 Feb 25;164(5):922-36. doi: 10.1016/j.cell.2016.02.001. PMID:26919429
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (168 Kb) [Save to disk]
  • Biological Unit Coordinates (5hj8.pdb1.gz) 161 Kb
  • LPC: Ligand-Protein Contacts for 5HJ8
  • CSU: Contacts of Structural Units for 5HJ8
  • Structure Factors (404 Kb)
  • Retrieve 5HJ8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HJ8 from S2C, [Save to disk]
  • Re-refined 5hj8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HJ8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HJ8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hj8] [5hj8_B] [5hj8_C] [5hj8_A] [5hj8_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5HJ8
  • Community annotation for 5HJ8 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science