5I85	Hydrolase	date	Feb 18, 2016
title	Asmase With Zinc And Phosphocholine
authors	Y.F.Zhou, R.R.Wei
compound		source
Molecule: Sphingomyelin Phosphodiesterase Chain: A Synonym: Acid Sphingomyelinase,Asmase Ec: 3.1.4.12 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Smpd1, Asm Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293s Gnt1- Expression_system_vector_type: Plasmid Expression_system_plasmid: Pires2
symmetry	Space Group: P 64 2 2	R_factor 0.190 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 131.601 131.601 188.573 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	BMA, MAN, NAG, PC, SO4, ZN	enzyme	Hydrolase E.C.3.1.4.12 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (188 Kb) [Save to disk] Biological Unit Coordinates (5i85.pdb1.gz) 179 Kb Biological Unit Coordinates (5i85.pdb2.gz) 711 Kb LPC: Ligand-Protein Contacts for 5I85 CSU: Contacts of Structural Units for 5I85 Structure Factors (2365 Kb) Retrieve 5I85 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5I85 from S2C, [Save to disk] Re-refined 5i85 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5I85 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5I85

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5i85] [5i85_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5I85: [SapB ] by SMART

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