5IHC Transferase Transferase Inhibitor date Feb 29, 2016
title Melk In Complex With Nvs-Melk12b
authors E.R.Sprague, T.Brazell
compound source
Molecule: Maternal Embryonic Leucine Zipper Kinase
Chain: A
Synonym: Hmelk,Protein Kinase Eg3,Peg3 Kinase,Protein Kinas Hpk38,Tyrosine-Protein Kinase Melk;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Melk, Kiaa0175
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 21 21 21
R_factor 0.178 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.370 67.810 103.860 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.14 Å
ligand 6BB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceToward the Validation of Maternal Embryonic Leucine Zipper Kinase: Discovery, Optimization of Highly Potent and Selective Inhibitors, and Preliminary Biology Insight., Toure BB, Giraldes J, Smith T, Sprague ER, Wang Y, Mathieu S, Chen Z, Mishina Y, Feng Y, Yan-Neale Y, Shakya S, Chen D, Meyer M, Puleo D, Brazell JT, Straub C, Sage D, Wright K, Yuan Y, Chen X, Duca J, Kim S, Tian L, Martin E, Hurov K, Shao W, J Med Chem. 2016 May 26;59(10):4711-23. doi: 10.1021/acs.jmedchem.6b00052. Epub, 2016 May 17. PMID:27187609
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (5ihc.pdb1.gz) 106 Kb
  • LPC: Ligand-Protein Contacts for 5IHC
  • CSU: Contacts of Structural Units for 5IHC
  • Structure Factors (511 Kb)
  • Retrieve 5IHC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IHC from S2C, [Save to disk]
  • Re-refined 5ihc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5IHC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5IHC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ihc_A] [5ihc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5IHC: [S_TKc ] by SMART
  • Other resources with information on 5IHC
  • Community annotation for 5IHC at PDBWiki (http://pdbwiki.org)

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