5IV4 Crystal structure of the human soluble cyclase in complex with the allosteric inhibitor LRE1 date
authors Kleinboelting, S., Steegborn, C.
compound source
symmetry
R_factor
R_Free 0.20626
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.79
ligand ACT, CL, CME, DMS, EDO, GOL, LRI, PEG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of LRE1 as a specific and allosteric inhibitor of soluble adenylyl cyclase., Ramos-Espiritu L, Kleinboelting S, Navarrete FA, Alvau A, Visconti PE, Valsecchi F, Starkov A, Manfredi G, Buck H, Adura C, Zippin JH, van den Heuvel J, Glickman JF, Steegborn C, Levin LR, Buck J, Nat Chem Biol. 2016 Aug 22. doi: 10.1038/nchembio.2151. PMID:27547922
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (5iv4.pdb1.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 5IV4
  • CSU: Contacts of Structural Units for 5IV4
  • Structure Factors (1087 Kb)
  • Retrieve 5IV4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IV4 from S2C, [Save to disk]
  • Re-refined 5iv4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5IV4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5IV4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5iv4] [5iv4_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5IV4: [CYCc ] by SMART
    • Other resources with information on 5IV4
  • Community annotation for 5IV4 at PDBWiki (http://pdbwiki.org)

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