5JEE Apo-structure of humanised RadA-mutant humRadA26F date
authors Fischer, G., Marsh, M., Moschetti, T., Sharpe, T., Scott, D., Morgan, M., Ng, H., Skidmore, J., Venkitaraman, A., Abell, C., Blundell, T.L., Hyvonen, M.
compound source
symmetry
R_factor
R_Free 0.2183
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.49
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceEngineering archeal surrogate systems for the development of protein-protein interaction inhibitors against human RAD51., Moschetti T, Sharpe T, Fischer G, Marsh ME, Ng H, Morgan M, Scott D, Blundell TL, Venkitaraman A, Skidmore J, Abell C, Hyvonen M, J Mol Biol. 2016 Oct 7. pii: S0022-2836(16)30424-7. doi:, 10.1016/j.jmb.2016.10.009. PMID:27725183
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (5jee.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 5JEE
  • CSU: Contacts of Structural Units for 5JEE
  • Structure Factors (884 Kb)
  • Retrieve 5JEE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JEE from S2C, [Save to disk]
  • Re-refined 5jee structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5JEE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5JEE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jee_A] [5jee]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5JEE: [AAA ] by SMART
    • Other resources with information on 5JEE
  • Community annotation for 5JEE at PDBWiki (http://pdbwiki.org)

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