5L25 Transport Protein date Jul 31, 2016
title Crystal Structure Of Arabidopsis Thaliana Bor1
authors B.H.Thurtle-Schmidt, R.M.Stroud
compound source
Molecule: Boron Transporter 1
Chain: A
Fragment: Unp Residues 1-645
Engineered: Yes
Other_details: The Solvent Content As Calculated By Matthew Coefficients Is High Since A Significant Portion Of Unit Ce Contains Detergent. Additionally, The Crystallized Protein Is 652 Residues, Of Which The Authors Were Able To Model 39
Organism_scientific: Arabidopsis Thaliana
Organism_common: Mouse-Ear Cress
Organism_taxid: 3702
Gene: Bor1, At2g47160, T3d7.3
Expression_system: Saccharomyces Cerevisiae
Expression_system_taxid: 4932
symmetry Space Group: P 42 21 2
R_factor 0.359 R_Free 0.391
crystal
cell
length a length b length c angle alpha angle beta angle gamma
184.557 184.557 89.826 90.00 90.00 90.00
method X-Ray Diffractionresolution 4.11 Å
Gene
Ontology
ChainFunctionProcessComponent
A
  • inorganic anion exchanger ac...
  • anion:anion antiporter activ...
  • active borate transmembrane ...


  • Primary referenceStructure of Bor1 supports an elevator transport mechanism for SLC4 anion exchangers., Thurtle-Schmidt BH, Stroud RM, Proc Natl Acad Sci U S A. 2016 Sep 6. pii: 201612603. PMID:27601653
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (5l25.pdb1.gz) 117 Kb
  • CSU: Contacts of Structural Units for 5L25
  • Structure Factors (200 Kb)
  • Retrieve 5L25 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5L25 from S2C, [Save to disk]
  • Re-refined 5l25 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5L25 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5L25
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5l25] [5l25_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5L25
  • Community annotation for 5L25 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science