5L34 Toxin date Aug 03, 2016
title Calculated Solution Structure Of [D-Trp3]-Contryphan-Vc2
authors S.B.Drane, S.Chhabra, C.A.Macraild
compound source
Molecule: [D-Trp3]-Contryphan-Vc2
Chain: A
Engineered: Yes
Synthetic: Yes
Organism_scientific: Conus Victoriae
Organism_taxid: 319920
methodSolution NMR
ligand DTR, NH2 enzyme
Primary referenceStructure and activity of contryphan-Vc2: Importance of the d-amino acid residue., Drane SB, Robinson SD, MacRaild CA, Chhabra S, Chittoor B, Morales RA, Leung EW, Belgi A, Espino SS, Olivera BM, Robinson AJ, Chalmers DK, Norton RS, Toxicon. 2017 Feb 17;129:113-122. doi: 10.1016/j.toxicon.2017.02.012. PMID:28216409
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (5l34.pdb1.gz) 2 Kb
  • LPC: Ligand-Protein Contacts for 5L34
  • CSU: Contacts of Structural Units for 5L34
  • Original NMR restraints for 5L34 from PDB
  • Retrieve 5L34 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5L34 from S2C, [Save to disk]
  • View 5L34 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5L34
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5l34_A] [5l34]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5L34
  • Community annotation for 5L34 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science