5LBC	Oxidoreductase	date	Jun 15, 2016
title	Hif Prolyl Hydroxylase 2 (Phd2egln1) I280vr281li292v Vari Complex With Mn(II) And N-[(1-Chloro-4-Hydroxyisoquinolin-3 Carbonyl]Glycine (Iox3fg2216)
authors	R.Chowdhury, C.J.Schofield
compound		source
Molecule: Egl Nine Homolog 1 Chain: A Fragment: Catalytic Domain (181-426) Synonym: Hypoxia-Inducible Factor Prolyl Hydroxylase 2,Hph- Hydroxylase Domain-Containing Protein 2,Phd2,Sm-20; Ec: 1.14.11.29 Engineered: Yes Mutation: Yes Other_details: Fragment: Catalytic Domain (181-426)		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Egln1, C1orf12, Pnas-118, Pnas-137 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_vector: Pet28a(+)
symmetry	Space Group: P 63	R_factor 0.158 R_Free 0.181
crystal cell	length a length b length c angle alpha angle beta angle gamma 111.006 111.006 40.283 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.82 Å
ligand	BCT, CL, GOL, MN, SO4, UN9	enzyme	Oxidoreductase E.C.1.14.11.29 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk] Biological Unit Coordinates (5lbc.pdb1.gz) 111 Kb LPC: Ligand-Protein Contacts for 5LBC CSU: Contacts of Structural Units for 5LBC Structure Factors (432 Kb) Retrieve 5LBC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5LBC from S2C, [Save to disk] Re-refined 5lbc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5LBC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5LBC

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5lbc_A] [5lbc] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5LBC: [P4Hc ] by SMART

Other resources with information on 5LBC

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