5LE0 Oxidoreductase date Jun 29, 2016
title Mical1 Cterminal Domain
authors H.Hammich, O.Pylypenko, A.Houdusse
compound source
Molecule: Protein-Methionine Sulfoxide Oxidase Mical1
Chain: B
Fragment: Unp Residues 918-1067
Synonym: Molecule Interacting With Casl Protein 1,Mical-1,N Interacting Protein With Calponin Homology And Lim Domains;
Ec: 1.14.13.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mical1, Mical, Nical
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 2 2
R_factor 0.271 R_Free 0.306
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.780 52.780 157.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.30 Å
ligand MSE enzyme Oxidoreductase E.C.1.14.13 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceOxidation of F-actin controls the terminal steps of cytokinesis., Fremont S, Hammich H, Bai J, Wioland H, Klinkert K, Rocancourt M, Kikuti C, Stroebel D, Romet-Lemonne G, Pylypenko O, Houdusse A, Echard A, Nat Commun. 2017 Feb 23;8:14528. doi: 10.1038/ncomms14528. PMID:28230050
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (5le0.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 5LE0
  • CSU: Contacts of Structural Units for 5LE0
  • Structure Factors (35 Kb)
  • Retrieve 5LE0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LE0 from S2C, [Save to disk]
  • Re-refined 5le0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LE0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5LE0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5le0] [5le0_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5LE0
  • Community annotation for 5LE0 at PDBWiki (http://pdbwiki.org)

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