5LIL Transport Protein date Jul 15, 2016
title Structure Of Aggregatibacter Actinomycetemcomitans Macb Boun (P21)
authors A.Crow
compound source
Molecule: Macrolide Export Atp-Bindingpermease Protein Mac
Chain: A, B
Ec: 3.6.3.-
Engineered: Yes
Mutation: Yes
 Organism_scientific: Aggregatibacter Actinomycetemcomitans
Organism_taxid: 714
Gene: Macb
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: C43(De3)
Expression_system_variant: C43
symmetry Space Group: P 1 21 1
R_factor 0.244 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
111.587 82.621 124.920 90.00 94.45 90.00
method X-Ray Diffractionresolution 3.35 Å
ligand ATP, MG enzyme Hydrolase E.C.3.6.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and mechanotransmission mechanism of the MacB ABC transporter superfamily., Crow A, Greene NP, Kaplan E, Koronakis V, Proc Natl Acad Sci U S A. 2017 Nov 6. pii: 201712153. doi:, 10.1073/pnas.1712153114. PMID:29109272
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (378 Kb) [Save to disk]
  • Biological Unit Coordinates (5lil.pdb1.gz) 372 Kb
  • LPC: Ligand-Protein Contacts for 5LIL
  • CSU: Contacts of Structural Units for 5LIL
  • Structure Factors (706 Kb)
  • Retrieve 5LIL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LIL from S2C, [Save to disk]
    • View 5LIL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5LIL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lil_A] [5lil_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5LIL
  • Community annotation for 5LIL at PDBWiki (http://pdbwiki.org)

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