5LQU Transferase date Aug 17, 2016
title Crystal Structure Of Comt In Complex With N-[(E)-3-[(2r,3s,4 [6-(Ethylamino)Purin-9-Yl]-3,4-Dihydroxyoxolan-2-Yl]Prop-2- (4-Fluorophenyl)-2,3-Dihydroxybenzamide
authors A.Ehler, C.Lerner, M.Ellermann, M.G.Rudolph
compound source
Molecule: Catechol O-Methyltransferase
Chain: A, B
Fragment: Soluble Form, Residues 44-264
Ec: 2.1.1.6
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Gene: Comt
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
symmetry Space Group: P 21 21 21
R_factor 0.163 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.154 61.571 130.941 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand 619, BTB, CL, MG enzyme Transferase E.C.2.1.1.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (5lqu.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (5lqu.pdb2.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 5LQU
  • CSU: Contacts of Structural Units for 5LQU
  • Structure Factors (6227 Kb)
  • Retrieve 5LQU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LQU from S2C, [Save to disk]
  • Re-refined 5lqu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5LQU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5LQU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lqu_B] [5lqu_A] [5lqu]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5LQU
  • Community annotation for 5LQU at PDBWiki (http://pdbwiki.org)

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