5OSC Transport Protein date Aug 17, 2017
title Glic-Gabaar Alpha1 Chimera Crystallized In Complex With Preg Sulfate At Ph 4.5
authors D.C.Laverty, M.G.Gold, T.G.Smart
compound source
Molecule: Proton-Gated Ion Channel,Gamma-Aminobutyric Acid Subunit Alpha-2,Gamma-Aminobutyric Acid Receptor Subunit Al
Chain: A, B, C, D, E
Synonym: Glic,Ligand-Gated Ion Channel,Lgic,Gaba(A) Recepto Alpha-2,Gaba(A) Receptor Subunit Alpha-1;
Engineered: Yes
Organism_scientific: Gloeobacter Violaceus (Strain Pcc 7421 Musculus;
Organism_common: Mouse
Organism_taxid: 251221, 10090
Strain: Pcc 7421
Gene: Glvi, Glr4197, Gabra2, Gabra-2, Gabra1, Gabra-1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: C 1 2 1
R_factor 0.211 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
183.310 133.180 161.860 90.00 102.71 90.00
method X-Ray Diffractionresolution 3.10 Å
ligand A8W, ACT, CL, Y01 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Primary referenceCrystal structures of a GABAA-receptor chimera reveal new endogenous neurosteroid-binding sites., Laverty D, Thomas P, Field M, Andersen OJ, Gold MG, Biggin PC, Gielen M, Smart TG, Nat Struct Mol Biol. 2017 Oct 2. doi: 10.1038/nsmb.3477. PMID:28967882
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (559 Kb) [Save to disk]
  • Biological Unit Coordinates (5osc.pdb1.gz) 548 Kb
  • LPC: Ligand-Protein Contacts for 5OSC
  • CSU: Contacts of Structural Units for 5OSC
  • Structure Factors (929 Kb)
  • Retrieve 5OSC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5OSC from S2C, [Save to disk]
  • View 5OSC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5OSC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5osc_D] [5osc_A] [5osc_B] [5osc_E] [5osc_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5OSC
  • Community annotation for 5OSC at PDBWiki (http://pdbwiki.org)

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