5Q0H	Hydrolase Hydrolase Inhibitor	date	May 01, 2017
title	Factor Xia In Complex With The Inhibitor Methyl [(4r,5e,8s)- 8-[(2,6-Difluoro-4-Methylbenzene-1-Carbonyl)Amino]-4-Methyl 3,4,7,8,10-Hexahydro-2h-12,9-(Azeno)-1,10-Benzodiazacyclote 15-Yl]Carbamate
authors	S.Sheriff
compound		source
Molecule: Coagulation Factor Xi Chain: A Fragment: Heavy Chain (Unp Residues 388-625) Synonym: Fxi,Plasma Thromboplastin Antecedent,Pta Ec: 3.4.21.27 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F11 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet14b
symmetry	Space Group: P 32 2 1	R_factor 0.168 R_Free 0.210
crystal cell	length a length b length c angle alpha angle beta angle gamma 78.690 78.690 105.990 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	9F1, EDO, SO4	enzyme	Hydrolase E.C.3.4.21.27 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Macrocyclic inhibitors of Factor XIa: Discovery of alkyl-substituted macrocyclic amide linkers with improved potency., Corte JR, Yang W, Fang T, Wang Y, Osuna H, Lai A, Ewing WR, Rossi KA, Myers JE Jr, Sheriff S, Lou Z, Zheng JJ, Harper TW, Bozarth JM, Wu Y, Luettgen JM, Seiffert DA, Quan ML, Wexler RR, Lam PYS, Bioorg Med Chem Lett. 2017 Aug 15;27(16):3833-3839. doi:, 10.1016/j.bmcl.2017.06.058. Epub 2017 Jun 23. PMID:28687203

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (5q0h.pdb1.gz) 45 Kb LPC: Ligand-Protein Contacts for 5Q0H CSU: Contacts of Structural Units for 5Q0H Structure Factors (704 Kb) Retrieve 5Q0H in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5Q0H from S2C, [Save to disk] Re-refined 5q0h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 5Q0H

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5q0h_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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