5SZ5 Lyase Lyase Inhibitor date Aug 12, 2016
title Carbonic Anhydrase Ix-Mimic In Complex With 4-(2-Methylpheny Benzenesulfonamide
authors A.Bhatt, B.P.Mahon, B.Cornelio, R.Mckenna
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonate Dehydratase II,Carbonic Anhydrase C,Cac, Anhydrase II,Ca-II;
Ec: 4.2.1.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.148 R_Free 0.164
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.084 41.210 72.411 90.00 103.81 90.00
method X-Ray Diffractionresolution 1.27 Å
ligand 72E, DMS, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure activity relationships of benzenesulfonamide-based inhibitors towards carbonic anhydrase isoform specificity., Bhatt A, Mahon BP, Cruzeiro VW, Cornelio B, Laronze-Cochard M, Ceruso M, Sapi J, Rance GA, Khlobystov AN, Fontana A, Roitberg A, Supuran CT, Mc Kenna R, Chembiochem. 2016 Nov 18. doi: 10.1002/cbic.201600513. PMID:27860128
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (134 Kb) [Save to disk]
  • Biological Unit Coordinates (5sz5.pdb1.gz) 129 Kb
  • LPC: Ligand-Protein Contacts for 5SZ5
  • CSU: Contacts of Structural Units for 5SZ5
  • Structure Factors (957 Kb)
  • Retrieve 5SZ5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5SZ5 from S2C, [Save to disk]
  • Re-refined 5sz5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5SZ5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5SZ5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5sz5_A] [5sz5]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5SZ5
  • Community annotation for 5SZ5 at PDBWiki (http://pdbwiki.org)

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