5TQ1 Hydrolase date Oct 21, 2016
title Phospholipase C Gamma-1 C-Terminal Sh2 Domain Bound To A Phosphopeptide Derived From The Insulin Receptor
authors D.S.Wuttke, M.A.Mckercher
compound source
Molecule: 1-Phosphatidylinositol 4,5-Bisphosphate Phosphodi Gamma-1;
Chain: A
Fragment: Unp Residues 663-759
Synonym: Plc-148,Phosphoinositide Phospholipase C-Gamma-1, Phospholipase C-II,Plc-II,Phospholipase C-Gamma-1,Plc-Gamma
Ec: 3.1.4.11
Engineered: Yes
 Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Gene: Plcg1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_cell_line: Bl21(De3)
Expression_system_plasmid: Pet15b

Molecule: Insulin Receptor
Chain: B
Fragment: Unp Residues 9-19
Engineered: Yes
Synthetic: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
symmetry Space Group: P 21 21 21
R_factor 0.172 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.010 55.140 58.665 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.49 Å
ligand PTR enzyme Hydrolase E.C.3.1.4.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMultimodal Recognition of Diverse Peptides by the C-Terminal SH2 Domain of Phospholipase C-gamma1 Protein., McKercher MA, Guan X, Tan Z, Wuttke DS, Biochemistry. 2017 Apr 11. doi: 10.1021/acs.biochem.7b00023. PMID:28376302
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (5tq1.pdb1.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 5TQ1
  • CSU: Contacts of Structural Units for 5TQ1
  • Structure Factors (232 Kb)
  • Retrieve 5TQ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TQ1 from S2C, [Save to disk]
  • Re-refined 5tq1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5TQ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5TQ1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tq1_A] [5tq1_B] [5tq1]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5TQ1
  • Community annotation for 5TQ1 at PDBWiki (http://pdbwiki.org)

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