5TQ6 Transferase Transferase Inhibitor date Oct 23, 2016
title Design And Synthesis Of A Pan-Jak Kinase Inhibitor Clinical (Pf-06263276) Suitable For Inhaled And Topical Delivery For Treatment Of Inflammatory Diseases Of The Lungs And Skin
authors J.Chrencik, P.Jones
compound source
Molecule: Tyrosine-Protein Kinase Jak2
Chain: A, B
Fragment: Unp Residues 837-1132
Synonym: Janus Kinase 2,Jak-2
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak2
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.257 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.981 183.403 52.582 90.00 110.59 90.00
method X-Ray Diffractionresolution 2.06 Å
ligand 7GV, PTR enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDesign and Synthesis of a Pan-Janus Kinase Inhibitor Clinical Candidate (PF-06263276) Suitable for Inhaled and Topical Delivery for the Treatment of Inflammatory Diseases of the Lungs and Skin., Jones P, Storer RI, Sabnis YA, Wakenhut FM, Whitlock GA, England KS, Mukaiyama T, Dehnhardt CM, Coe JW, Kortum SW, Chrencik JE, Brown DG, Jones RM, Murphy JR, Yeoh T, Morgan P, Kilty I, J Med Chem. 2017 Jan 4. doi: 10.1021/acs.jmedchem.6b01634. PMID:27983835
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (5tq6.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (5tq6.pdb2.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 5TQ6
  • CSU: Contacts of Structural Units for 5TQ6
  • Structure Factors (821 Kb)
  • Retrieve 5TQ6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TQ6 from S2C, [Save to disk]
  • Re-refined 5tq6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5TQ6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5TQ6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tq6_B] [5tq6] [5tq6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5TQ6
  • Community annotation for 5TQ6 at PDBWiki (http://pdbwiki.org)

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