5U03 Ligase, Protein Fibril date Nov 22, 2016
title Cryo-Em Structure Of The Human Ctp Synthase Filament
authors E.M.Lynch, J.M.Kollman
compound source
Molecule: Ctp Synthase 1
Chain: A, B, C, D
Synonym: Ctp Synthetase 1, Utp--Ammonia Ligase 1
Ec: 6.3.4.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ctps1, Ctps
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Yeast
Expression_system_taxid: 4932
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 6.10 Å
ligand ATP, UTP enzyme Ligase E.C.6.3.4.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceHuman CTP synthase filament structure reveals the active enzyme conformation., Lynch EM, Hicks DR, Shepherd M, Endrizzi JA, Maker A, Hansen JM, Barry RM, Gitai Z, Baldwin EP, Kollman JM, Nat Struct Mol Biol. 2017 May 1. doi: 10.1038/nsmb.3407. PMID:28459447
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (334 Kb) [Save to disk]
  • Biological Unit Coordinates (5u03.pdb1.gz) 1296 Kb
  • LPC: Ligand-Protein Contacts for 5U03
  • CSU: Contacts of Structural Units for 5U03
  • Retrieve 5U03 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U03 from S2C, [Save to disk]
  • View 5U03 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5U03
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u03_D] [5u03_A] [5u03_B] [5u03] [5u03_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5U03
  • Community annotation for 5U03 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science