5U2E Transcription Regulator Inhibitor date Nov 30, 2016
title Brd4 First Bromodomain (Bd1) In Complex With Dual Pi3 Kinase Inhibitor Sf2535
authors F.H.Andrews, T.G.Kutateladze
compound source
Molecule: Bromodomain-Containing Protein 4
Chain: A, B
Synonym: Protein Hunk1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brd4, Hunk1
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 1 21 1
R_factor 0.196 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.943 39.701 62.470 90.00 100.14 90.00
method X-Ray Diffractionresolution 1.99 Å
ligand 837 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (5u2e.pdb1.gz) 26 Kb
  • Biological Unit Coordinates (5u2e.pdb2.gz) 25 Kb
  • LPC: Ligand-Protein Contacts for 5U2E
  • CSU: Contacts of Structural Units for 5U2E
  • Structure Factors (259 Kb)
  • Retrieve 5U2E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U2E from S2C, [Save to disk]
  • Re-refined 5u2e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5U2E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5U2E
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u2e] [5u2e_B] [5u2e_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5U2E
  • Community annotation for 5U2E at PDBWiki (http://pdbwiki.org)

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