5UT1 Transferase Transferase Inhibitor date Feb 14, 2017
title Jak2 Jh2 In Complex With Bi-D1870
authors D.E.Puleo, J.Schlessinger
compound source
Molecule: Tyrosine-Protein Kinase Jak2
Chain: A
Synonym: Janus Kinase 2,Jak-2
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1 21 1
R_factor 0.163 R_Free 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.479 57.563 60.678 90.00 110.30 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand 7DZ, GOL enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceIdentification and Characterization of JAK2 Pseudokinase Domain Small Molecule Binders., Puleo DE, Kucera K, Hammaren HM, Ungureanu D, Newton AS, Silvennoinen O, Jorgensen WL, Schlessinger J, ACS Med Chem Lett. 2017 May 17;8(6):618-621. doi: 10.1021/acsmedchemlett.7b00153., eCollection 2017 Jun 8. PMID:28626521
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (5ut1.pdb1.gz) 90 Kb
  • LPC: Ligand-Protein Contacts for 5UT1
  • CSU: Contacts of Structural Units for 5UT1
  • Structure Factors (203 Kb)
  • Retrieve 5UT1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UT1 from S2C, [Save to disk]
  • Re-refined 5ut1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5UT1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5UT1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ut1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5UT1
  • Community annotation for 5UT1 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science