5V6P	Transferase	date	Mar 17, 2017
title	Cryoem Structure Of The Erad-Associated E3 Ubiquitin-Protein Hrd1
authors	S.Schoebel, W.Mi, A.Stein, T.A.Rapoport, M.Liao
compound		source
Molecule: Erad-Associated E3 Ubiquitin-Protein Ligase Hrd1 Chain: A, B Fragment: Unp Residues 1-407 Synonym: Hmg-Coa Reductase Degradation Protein 1,Ring-Type Ubiquitin Transferase Hrd1; Ec: 2.3.2.27 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c Atcc: 204508 S288c Gene: Hrd1, Der3, Yol013c Expression_system: Saccharomyces Cerevisiae Expression_system_taxid: 4932 Expression_system_plasmid: Prs426
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	4.10 Å
ligand		enzyme	Transferase E.C.2.3.2.27 BRENDA
Primary reference	Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3., Schoebel S, Mi W, Stein A, Ovchinnikov S, Pavlovicz R, DiMaio F, Baker D, Chambers MG, Su H, Li D, Rapoport TA, Liao M, Nature. 2017 Aug 17;548(7667):352-355. doi: 10.1038/nature23314. Epub 2017 Jul 6. PMID:28682307

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (156 Kb) [Save to disk] Biological Unit Coordinates (5v6p.pdb1.gz) 152 Kb CSU: Contacts of Structural Units for 5V6P Retrieve 5V6P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5V6P from S2C, [Save to disk]

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Structure-derived information

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Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5v6p_A] [5v6p_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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