5V89	Ligase Protein Binding	date	Mar 21, 2017
title	Structure Of Dcn4 Pony Domain Bound To Cul1 Whb
authors	R.K.Guy, B.A.Schulman, D.C.Scott, J.T.Hammill
compound		source
Molecule: Dcn1-Like Protein 4 Chain: A Fragment: Residues 102-292 Synonym: Dcun1 Domain-Containing Protein 4,Defective In Cul Neddylation Protein 1-Like Protein 4; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dcun1d4, Kiaa0276 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex
Molecule: Cullin-1 Chain: C Fragment: Whb Subdomain Residues 702-776 Synonym: Cul-1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cul1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex
symmetry	Space Group: C 1 2 1	R_factor 0.151 R_Free 0.194
crystal cell	length a length b length c angle alpha angle beta angle gamma 118.930 62.476 38.580 90.00 105.48 90.00
method	X-Ray Diffraction	resolution	1.55 Å
Gene Ontology	Chain Function Process Component C
Primary reference	Blocking an N-terminal acetylation-dependent protein interaction inhibits an E3 ligase., Scott DC, Hammill JT, Min J, Rhee DY, Connelly M, Sviderskiy VO, Bhasin D, Chen Y, Ong SS, Chai SC, Goktug AN, Huang G, Monda JK, Low J, Kim HS, Paulo JA, Cannon JR, Shelat AA, Chen T, Kelsall IR, Alpi AF, Pagala V, Wang X, Peng J, Singh B, Harper JW, Schulman BA, Guy RK, Nat Chem Biol. 2017 Jun 5. doi: 10.1038/nchembio.2386. PMID:28581483

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk] Biological Unit Coordinates (5v89.pdb1.gz) 99 Kb Biological Unit Coordinates (5v89.pdb2.gz) 33 Kb CSU: Contacts of Structural Units for 5V89 Structure Factors (779 Kb) Retrieve 5V89 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5V89 from S2C, [Save to disk] Re-refined 5v89 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5v89] [5v89_C] [5v89_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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