5VSW		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	G4P, MG, ZN	enzyme
Gene Ontology	Chain Function Process Component C, I E, K G, A, B, H J, D L, F bacterial sigma factor activ... M
Primary reference	Allosteric Effector ppGpp Potentiates the Inhibition of Transcript Initiation by DksA., Molodtsov V, Sineva E, Zhang L, Huang X, Cashel M, Ades SE, Murakami KS, Mol Cell. 2018 Mar 1;69(5):828-839.e5. doi: 10.1016/j.molcel.2018.01.035. Epub, 2018 Feb 22. PMID:29478808

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2494 Kb) [Save to disk] Biological Unit Coordinates (5vsw.pdb1.gz) 1300 Kb Biological Unit Coordinates (5vsw.pdb2.gz) 1192 Kb LPC: Ligand-Protein Contacts for 5VSW CSU: Contacts of Structural Units for 5VSW Structure Factors (1953 Kb) Retrieve 5VSW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VSW from S2C, [Save to disk] Re-refined 5vsw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5VSW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vsw_A] [5vsw_B] [5vsw_C] [5vsw_D] [5vsw_E] [5vsw_F] [5vsw_G] [5vsw_H] [5vsw_I] [5vsw_J] [5vsw_K] [5vsw_L] [5vsw_M] SWISS-PROT database:

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