5X1W	Transferase	date	Jan 27, 2017
title	Pkm2 In Complex With Compound 5
authors	Y.Matsui, H.Hanzawa
compound		source
Molecule: Pyruvate Kinase Pkm Chain: A, B, C, D Synonym: Cytosolic Thyroid Hormone-Binding Protein,Cthbp,Op Interacting Protein 3,Oip-3,Pyruvate Kinase 23,Pyruvate Ki Muscle Isozyme,Thyroid Hormone-Binding Protein 1,Thbp1,Tumo P58; Ec: 2.7.1.40 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pkm, Oip3, Pk2, Pk3, Pkm2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid
symmetry	Space Group: P 1 21 1	R_factor 0.237 R_Free 0.290
crystal cell	length a length b length c angle alpha angle beta angle gamma 80.823 153.486 94.207 90.00 103.52 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	7Y0, FBP	enzyme	Transferase E.C.2.7.1.40 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (627 Kb) [Save to disk] Biological Unit Coordinates (5x1w.pdb1.gz) 619 Kb LPC: Ligand-Protein Contacts for 5X1W CSU: Contacts of Structural Units for 5X1W Structure Factors (2277 Kb) Retrieve 5X1W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5X1W from S2C, [Save to disk] Re-refined 5x1w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5X1W in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5X1W

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5x1w_B] [5x1w_A] [5x1w_D] [5x1w_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5X1W

Community annotation for 5X1W at PDBWiki (http://pdbwiki.org)

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